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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aqcoe1G024700.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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Family | bHLH | ||||||||
Protein Properties | Length: 232aa MW: 25914.3 Da PI: 10.0764 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 32.3 | 1.8e-10 | 29 | 75 | 2 | 51 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYI 51 r+ h+ +Er RR+ +++ f L +llP+a + + + ++iL + ++YI Aqcoe1G024700.1.p 29 RERHKLAERERRKSMRELFLSLHSLLPHA---NTVRKEQSSILDEIIKYI 75 899**************************...99***************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 1.57E-11 | 19 | 91 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 8.51E-7 | 27 | 75 | No hit | No description |
PROSITE profile | PS50888 | 12.125 | 27 | 78 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.1E-7 | 29 | 75 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.2E-9 | 29 | 92 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 0.003 | 33 | 91 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence Send to blast |
MTVEWNNDWE TVSSEGKSSG SNGAPIDARE RHKLAERERR KSMRELFLSL HSLLPHANTV 60 RKEQSSILDE IIKYIPLAAA RLRSLQNRKD SVPLNRSNKT ASPTIQVSDR KSSDSMNSSD 120 CDIRVAPEPS SSVAIRVRGD RVNVSLTDTK GTSQTLLLSV ILDELEAHNL ELVRSTHCRD 180 GSKVVHHSES KISDGLEKSP TLLKTRLQEL ACRLHKLRKS SALKRTFEQL D* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010246746.1 | 1e-114 | PREDICTED: uncharacterized protein LOC104589957 | ||||
TrEMBL | E3WDH2 | 1e-137 | E3WDH2_COPJA; BHLH transcriptional factor |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41240.2 | 2e-06 | basic helix-loop-helix protein 100 |
Link Out ? help Back to Top | |
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Phytozome | Aqcoe1G024700.1.p |